Bispecific antibody for cancer immunotherapy

ABSTRACT

Disclosed are compositions and methods for targeted treatment of TAG-72-expressing cancers. In particular, bispecific antibodies are disclosed that are able to engage T-cells to destroy TAG-72-expressing malignant cells.

CROSS-REFERENCE TO RELATED APPLICATIONS

This application is a continuation of U.S. patent application Ser. No.16/058,398, filed Aug. 8, 2018, which is a continuation of U.S. patentapplication Ser. No. 15/120,033, which is a national stage application,filed under 35 U.S.C. § 371, of International Patent Application No.PCT/US15/61566, filed on Nov. 19, 2015, which claims benefit of U.S.Provisional Application No. 62/088,577, filed Dec. 6, 2014, which arehereby incorporated herein by reference in their entireties.

BACKGROUND

Surgery, radiation therapy, and chemotherapy have been the standardaccepted approaches for treatment of cancers including leukemia, solidtumors, and metastases. Immunotherapy (sometimes called biologicaltherapy, biotherapy, or biological response modifier therapy), whichuses the body's immune system, either directly or indirectly, to shrinkor eradicate cancer has been studied for many years as an adjunct toconventional cancer therapy. It is believed that the human immune systemis an untapped resource for cancer therapy and that effective treatmentcan be developed once the components of the immune system are properlyharnessed.

SUMMARY

Disclosed are bispecific antibodies that are able to engage T-cells todestroy TAG-72-expressing malignant cells. The antibodies can beengineered from fusion polypeptides comprising 1) variable domains ofantibodies that specifically bind an immune cell antigen and 2) variabledomains of antibodies that specifically bind TAG-72. In someembodiments, the antibody is a diabody (fusion polypeptide) having, forexample, the following formula:

V_(L)I−V_(H)T & V_(L)T−V_(H)I, or

V_(H)I−V_(L)T & V_(H)T−V_(L)I,

wherein “V_(L)I” is a light chain variable domain specific for an immunecell antigen;

wherein “V_(H)T” is a heavy chain variable domain specific for TAG-72;

wherein “V_(L)T” is a light chain variable domain specific for TAG-72;

wherein “V_(H)I” is a heavy chain variable domain specific for theimmune cell antigen; and

wherein “—” consists of a peptide linker or a peptide bond.

In some embodiments, the antibody is a Bispecific T-Cell Engaging (BiTE)antibody (fusion polypeptide) having, for example, the followingformula:

V_(L)I−V_(H)I—V_(L)T−V_(H)T,

V_(H)I−V_(L)I—V_(H)T−V_(L)T,

V_(L)I−V_(H)I—V_(H)T−V_(L)T, or

V_(H)I−V_(L)I—V_(L)T−V_(H)T,

wherein “V_(L)I” is a light chain variable domain specific for an immunecell antigen;

wherein “V_(H)T” is a heavy chain variable domain specific for TAG-72;

wherein “V_(L)T” is a light chain variable domain specific for TAG-72;

wherein “V_(H)I” is a heavy chain variable domain specific for theimmune cell antigen;

wherein “—” consists of a peptide linker or a peptide bond; and

wherein “—” consists of a peptide linker or a peptide bond.

The immune cell antigen can be a cell surface molecule that is expressedon human NK cells, T cells, monocytes, macrophages or granulocytes. Forexample, the cell surface molecule can be antigen CD2, CD3, CD16, CD64,CD89; NKp30, NKp44, NKp46, NKp80 (KLR-F1), NKG2C or NKG2D.

Also disclosed is an isolated nucleic acid encoding the disclosed fusionpolypeptide, as well as nucleic acid vectors containing this isolatednucleic acid operably linked to an expression control sequence. Alsodisclosed are cells transfected with these vectors and the use of thesecells to produce the disclosed fusion polypeptides.

A bi-specific antigen binding molecule can be formed from dimerizationof heavy and light chains. In these embodiments, the V_(L)I dimerizeswith V_(H)I to form an antigen binding site for an immune cell antigen(e.g., CD3) and the V_(H)T dimerizes with V_(L)T to form an antigenbinding site for TAG-72.

Also disclosed is a bispecific antibody that is a single polypeptidechain comprising a bispecific antibody having a first antigen-bindingregion and a second antigen-binding region. In some cases, the firstantigen-binding region is capable of recruiting the activity of a humanimmune effector cell by specifically binding to an immune cell antigenlocated on the human immune effector cell; and the secondantigen-binding region is capable of specifically binding to TAG-72 on atarget cell.

Each of the first and second portions can comprise 1, 2, 3, or moreantibody variable domains. In particular embodiments, each of the firstand second portions contains two variable domains, a variable heavy(V_(H)) domain and a variable light (V_(L)) domain.

In some cases, the bispecific antibody has an affinity for TAG-72corresponding to a K_(D) of about 10⁻⁷ M, 10⁻⁸ M, 10⁻⁹ M, or less.

Each of the first and second portions can be derived from naturalantibodies, such as monoclonal antibodies. In some cases, the antibodyis human. In some cases, the bispecific antibody has undergone analteration to render it less immunogenic when administered to humans.For example, the alteration comprises one or more techniques selectedfrom the group consisting of chimerization, humanization, CDR-grafting,deimmunization, and mutation of framework amino acids to correspond tothe closest human germline sequence.

Currently, the most widely used technique for antibody human adaptationis known as “CDR grafting.” The scientific basis of this technology isthat the binding specificity of an antibody resides primarily within thethree hypervariable loops known as the complementarity determiningregions (CDRs) of its light and heavy chain variable regions(V-regions), whereas the more conserved framework regions (framework,FW; framework region, FR) provide structure support function. Bygrafting the CDRs to an appropriately selected FW, some or all of theantibody-binding activity can be transferred to the resultingrecombinant antibody.

CDR grafting is the selection of a most appropriate human antibodyacceptor for the graft. Various strategies have been developed to selecthuman antibody acceptors with the highest similarities to the amino acidsequences of donor CDRs or donor FW, or to the donor structures. Allthese “best fit” strategies, while appearing very rational, are in factbased on one assumption, i.e., a resulting recombinant antibody that ismost similar (in amino acid sequence or in structure) to the originalantibody will best preserve the original antigen binding activity.

Not all amino acids in the CDRs are involved in antigen binding. Thus,it has been proposed that the grafting of only those residues that arecritical in antigen-antibody interaction—the so-called specificitydetermining residues grafting (SDR-grafting)—will further increase thecontent of human antibody sequences in the resulting recombinantantibody. The application of this strategy requires information on theantibody structure as well as antibody-antigen contact residues, whichare quite often unavailable. Even when such information is available,there is no systematic method to reliably identify the SDRs, andSDR-grafting remains so far mostly at the basic research level.

Recently, a strategy called “human framework shuffling” has beendeveloped. This technique works by ligating DNA fragments encoding CDRsto DNA fragments encoding human FR1, FR2, FR3, and FR4, thus generatinga library of all combinations between donor CDRs and human FRs. Methodsfor making human-adapted antibodies based on molecular structures,modeling and sequences for human engineering of antibody molecules aredisclosed in U.S. Pat. No. 8,748,356, which is incorporated by referencefor these methods.

The effector cell recruited by the bispecific antibody is one capable ofexerting a cytotoxic or an apoptotic effect on a target cell. In someembodiments, the human effector cell can in some embodiments be a memberof the human lymphoid lineage or myeloid lineage. As an example, forlymphoid cells, the immune cell antigen can be selected from the groupconsisting of human CD3 antigen, human CD16 antigen, human NKG2Dantigen, human CD2 antigen, human CD28 antigen, and human CD25 antigen.Similarly, for myeloid cells, the immune cell antigen can be human CD64antigen or human CD89 antigen.

Also disclosed is a pharmaceutical composition comprising a moleculedisclosed herein in a pharmaceutically acceptable carrier. Alsodisclosed is a method for treating cancer in a subject that involvesadministering to the subject a therapeutically effective amount of adisclosed pharmaceutical composition. Also disclosed is a kit comprisinga bispecific antibody disclosed herein.

Also disclosed is an expression vector comprising an isolated nucleicacid encoding a bispecific antibody disclosed herein operably linked toan expression control sequence. Also disclosed is a cell comprising thedisclosed expression vector. The cell can be a primary cell, transformedcell, cell line, or the like. In some cases, the cell is a mammaliancell line. In some cases, the cell is a non-mammalian cell line. Forexample, the cell can be a bacteria or insect cell line.

The details of one or more embodiments of the invention are set forth inthe accompanying drawings and the description below. Other features,objects, and advantages of the invention will be apparent from thedescription and drawings, and from the claims.

DESCRIPTION OF DRAWINGS

FIG. 1 is a map of a plasmid for 83D4 BITE antibody.

FIGS. 2A and 2B show flow cytometry binding of 83D4 BITE antibody tojurkat (FIG. 2A) and MCF-7 (FIG. 2B) cell lines.

FIG. 3 is a map of the CC49 expression cassette.

FIGS. 4A and 4B shows flow cytometry binding of CC49 antibody to jurkat(FIG. 4A) and MCF-7 (FIG. 4B) cell lines.

FIGS. 5A and 5B show dose dependent binding of CC49 antibody to MCF-7cells using 200 μg (FIG. 5A, 9.89% binding) and 400 μg (FIG. 5B, 18.5%binding) antibody.

FIG. 6 shows TAG-72 BITE binding to OVACAR3.

FIG. 7 shows T cell mediated killing by TAG-72 BITE.

DETAILED DESCRIPTION

Many different cancers express abnormal cell surface markers and thesemarkers can be used to identify and target them while sparing normaltissues. One of these markers is TAG-72, which is also known by the nameSialyl Tn. This glycoprotein is considered a pan-carcinoma marker thatis widely expressed in numerous solid tumors including breast andgynecologic cancers. This target is used herein to make the cancer cellsmore susceptible to immune attack via a bispecific antibody, such as abispecific T cell engager (BITE) antibody. These antibodies have bindingactivity against two different targets, with one of the targets being animmune cell receptor, such as the CD3 receptor present on killer Timmune cells. The concept is that the BITE antibody will activate thekiller T cell once it binds to the CD3, while the other end of theantibody binds TAG-72on the surface of the cancer cells. The activated Tcell will be held in close proximity to the cancer cell and start tokill the cancer cell through an immune mediated attack. A bispecificantibody is disclosed that can be used in immunotherapy approachesagainst TAG-72 expressing tumor cells.

Disclosed are compositions and methods for targeted treatment ofTAG-72-expressing cancers. In particular, bi-specific T-cell engagers(BiTEs) are disclosed that are able to direct cytotoxic T-cells toTAG-72-expressing cancers.

Provided are fusion polypeptides capable of forming a bispecificengineered antibody that is able to engage T-cells to destroy TAG-72expressing malignant cells. The engineered antibody may comprise forexample, at least one scFv, at least one Fab fragment, at least one Fvfragment, etc. It may be bivalent, trivalent, tetravalent, etc. Themultivalent antibodies is multispecific, e.g., bispecific, trispecific,tetraspecific, etc. The multivalent antibodies may be in any form, suchas a diabody, triabody, tetrabody, etc.

Bispecific Antibodies

Bispecific antibodies may contain a heavy chain comprising one or morevariable regions and/or a light chain comprising one or more variableregions. Bispecific antibodies can be constructed using only antibodyvariable domains. A fairly efficient and relatively simple method is tomake the linker sequence between the V_(H) and V_(L) domains so shortthat they cannot fold over and bind one another. Reduction of the linkerlength to 3-12 residues prevents the monomeric configuration of the scFvmolecule and favors intermolecular VH-VL pairings with formation of a 60kDa non-covalent scFv dimer “diabody”. The diabody format can also beused for generation of recombinant bis-pecific antibodies, which areobtained by the noncovalent association of two single-chain fusionproducts, consisting of the VH domain from one antibody connected by ashort linker to the VL domain of another antibody. Reducing the linkerlength still further below three residues can result in the formation oftrimers (“triabody”, about 90 kDa) or tetramers (“tetrabody”, about 120kDa). For a review of engineered antibodies, particularly single domainfragments, see Holliger and Hudson, 2005, Nature Biotechnology,23:1126-1136. All of such engineered antibodies may be used in thefusion polypeptides provided herein.

Peptide linkers (—) suitable for production of scFv antibodies aredescribed in Kumada Y, et al. Biochemical Engineering Journal. 2007 35(2):158-165; Albrecht H, et al. J Immunol Methods. 2006 310(1-2):100-16; Feng J, et al. J Immunol Methods. 2003 282 (1-2):33-43;Griffiths A D, et al. Curr Opin Biotechnol. 1998 9 (1):102-8; Huston JS, et al. Methods Enzymol. 1991 203:46-88; Bird R E, et al. Science.1988 242 (4877):423-6; Takkinen K, et al. Protein Eng. 1991 4(7):837-41; Smallshaw J E, et al. Protein Eng. 1999 12 (7):623-30; ArgosP. J Mol Biol. 1990 211 (4):943-58; and Whitlow M, et al. Protein Eng.1993 6 (8):989-95, which are hereby incorporated by reference for theteachings of these linkers and methods of producing scFv antibodiesagainst different targets using various linkers.

Tetravalent Tandab® may be prepared substantially as described in WO1999057150 A3 or US20060233787, which are incorporated by reference forthe teaching of methods of making Tandab® molecules.

The antigen recognition sites or entire variable regions of theengineered antibodies may be derived from one or more parentalantibodies directed against any antigen of interest (e.g., TAG-72). Theparental antibodies can include naturally occurring antibodies orantibody fragments, antibodies or antibody fragments adapted fromnaturally occurring antibodies, antibodies constructed de novo usingsequences of antibodies or antibody fragments known to be specific foran antigen of interest. Sequences that may be derived from parentalantibodies include heavy and/or light chain variable regions and/orCDRs, framework regions or other portions thereof.

In some cases, the V_(H)T comprises the amino acid sequence SEQ ID NO:2,or a fragment or variant thereof able to bind TAG-72. In some cases, theV_(L)T comprises the amino acid sequence SEQ ID NO:4, or a fragment orvariant thereof able to bind TAG-72.

The affinity/specificity of the binding construct is driven in largepart by specific sequences within complementarity determining regions(CDRs) in the heavy and light chain. Each V_(H) and V_(L) sequence willhave three CDRs (CDR1, CDR2, CDR3). In some embodiments, the V_(H)Tcomprises an amino acid sequence variant of SEQ ID NO:2 comprising atleast the following CDR domains: CDR1: DHAIH (SEQ ID NO:12), CDR2:WIGYFSPGNDDFKYNERFKG (SEQ ID NO:13), and CDR3: LNMAY (SEQ ID NO:14). Insome cases, the second antigen-binding region comprises a V_(H) domainhaving the amino acid sequence of SEQ ID NO: 2. In some embodiments, theV_(L)T comprises an amino acid sequence variant of SEQ ID NO:2comprising at least the following CDR domains: CDR1: KSSQSLLYSGNQKNYLA(SEQ ID NO:15), CDR2: WASARES (SEQ ID NO:16), and CDR3: QQYYSYPLT (SEQID NO:17). In some cases, the second antigen-binding region comprises aV_(L) domain having the amino acid sequence of SEQ ID NO:4.

The particular length of the peptide linker (—) used to join the scFvmolecules together is important in determining half-life,immunogenicity, and activity of the overall construct. In someembodiments, the linker sequence (—) is 4, 5, 6, 7, 8, 9, 10, 11, 12,13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 or more amino acidsin length. In some embodiments, the linker sequence (—) comprises GGGGS(SEQ ID NO:18). In some cases, the linker comprises 2, 3, 4, 5, or moreGGGGS sequences. The linker is preferably long enough to not interferewith proper folding and association of the V_(H)-V_(L) chains but not solong as to cause added immunogenicity.

Most variations occur in the CDR3 regions therefore it is predicted thatmuch of the specificity is dictated by sequence changes in theseregions. Affinity maturation using site directed mutagenesis and phagelibrary experiments can be used to determine high affinity TAG72sequences. This would focus on mutations in these key regions(particularly CDR3). In some cases, the V_(H)T and V_(S)T sequencescomprise one or more amino acid substitutions within the above describedCDR1, CDR2, and/or CDR3 sequences, including 1, 2, or 3 amino acidsubstitutions. These substitutions can be assayed using routineimmunoassay techniques to evaluate changes in affinity for TAG-72.

In some cases, the V_(H)I-V_(L)I scFv sequence comprises the amino acidsequence DIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSVEGGSGGSGGSGGSGGVDDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSM EAEDAATYYCQQWSSNPLTFGAGTKLELKHHHHHH (SEQID NO:19, OKT3-H6), or a fragment or variant thereof able to bind CD-3.This is a commonly used sequence of T cell activating antibodies whichwork through binding of a set of narrow sequences on the CD3 epsilonsubunit (AAs 34, 46, 48, and 79-85). The poly histidine tag at the endof the sequence allows for purification of the artificial construct anduse of his tagged fluorescence antibodies for detection.

In particular cases, the antibody has a sequence as set out in SEQ IDNO: 11.

Candidate engineered antibodies for inclusion in the fusionpolypeptides, or the fusion polypeptides themselves, may be screened foractivity using a variety of known assays. For example, screening assaysto determine binding specificity are well known and routinely practicedin the art. For a comprehensive discussion of such assays, see Harlow etal. (Eds.), ANTIBODIES: A LABORATORY MANUAL; Cold Spring HarborLaboratory; Cold Spring Harbor, N.Y., 1988, Chapter 6.

In some embodiments, the bispecific antibody may be subjected to analteration to render it less immunogenic when administered to a human.Such an alteration may comprise one or more of the techniques commonlyknown as chimerization, humanization, CDR-grafting, deimmunizationand/or mutation of framework region amino acids to correspond to theclosest human germline sequence (germlining). Bispecific antibodieswhich have been altered will therefore remain administrable for a longerperiod of time with reduced or no immune response-related side effectsthan corresponding bispecific antibodies which have not undergone anysuch alteration(s). One of ordinary skill in the art will understand howto determine whether, and to what degree an antibody must be altered inorder to prevent it from eliciting an unwanted host immune response.

Pharmaceutical Composition

Also disclosed is a pharmaceutical composition comprising a disclosedmolecule in a pharmaceutically acceptable carrier. Pharmaceuticalcarriers are known to those skilled in the art. These most typicallywould be standard carriers for administration of drugs to humans,including solutions such as sterile water, saline, and bufferedsolutions at physiological pH. For example, suitable carriers and theirformulations are described in Remington: The Science and Practice ofPharmacy (21 ed.) ed. PP. Gerbino, Lippincott Williams & Wilkins,Philadelphia, PA. 2005. Typically, an appropriate amount of apharmaceutically-acceptable salt is used in the formulation to renderthe formulation isotonic. Examples of the pharmaceutically-acceptablecarrier include, but are not limited to, saline, Ringer's solution anddextrose solution. The pH of the solution is preferably from about 5 toabout 8, and more preferably from about 7 to about 7.5. The solutionshould be RNAse free. Further carriers include sustained releasepreparations such as semipermeable matrices of solid hydrophobicpolymers containing the antibody, which matrices are in the form ofshaped articles, e.g., films, liposomes or microparticles. It will beapparent to those persons skilled in the art that certain carriers maybe more preferable depending upon, for instance, the route ofadministration and concentration of composition being administered.

Pharmaceutically acceptable carriers include any and all suitablesolvents, dispersion media, coatings, antibacterial and antifungalagents, isotonicity agents, antioxidants and absorption delaying agents,and the like that are physiologically compatible with a bispecificantibody of the present invention. Examples of suitable aqueous andnonaqueous carriers which may be employed in the pharmaceuticalcompositions of the present invention include water, saline, phosphatebuffered saline, ethanol, dextrose, polyols (such as glycerol, propyleneglycol, polyethylene glycol, and the like), and suitable mixturesthereof, vegetable oils, carboxymethyl cellulose colloidal solutions,tragacanth gum and injectable organic esters, such as ethyl oleate,and/or various buffers. Pharmaceutically acceptable carriers includesterile aqueous solutions or dispersions and sterile powders for theextemporaneous preparation of sterile injectable solutions ordispersion. Proper fluidity may be maintained, for example, by the useof coating materials, such as lecithin, by the maintenance of therequired particle size in the case of dispersions, and by the use ofsurfactants.

Pharmaceutical bispecific antibodies may also comprise pharmaceuticallyacceptable antioxidants for instance (1) water soluble antioxidants,such as ascorbic acid, cysteine hydrochloride, sodium bisulfate, sodiummetabisulfite, sodium sulfite and the like; (2) oil-solubleantioxidants, such as ascorbyl palmitate, butylated hydroxyanisole,butylated hydroxytoluene, lecithin, propyl gallate, alpha-tocopherol,and the like; and (3) metal chelating agents, such as citric acid,ethylenediamine tetraacetic acid (EDTA), sorbitol, tartaric acid,phosphoric acid, and the like.

Pharmaceutical bispecific antibodies may also comprise isotonicityagents, such as sugars, polyalcohols, such as mannitol, sorbitol,glycerol or sodium chloride in the compositions.

The pharmaceutical bispecific antibodies may also contain one or moreadjuvants appropriate for the chosen route of administration such aspreservatives, wetting agents, emulsifying agents, dispersing agents,preservatives or buffers, which may enhance the shelf life oreffectiveness of the pharmaceutical composition. The bispecificantibodies may be prepared with carriers that will protect thebispecific antibody against rapid release, such as a controlled releaseformulation, including implants, transdermal patches, andmicroencapsulated delivery systems. Such carriers may include gelatin,glyceryl monostearate, glyceryl distearate, biodegradable, biocompatiblepolymers such as ethylene vinyl acetate, polyanhydrides, polyglycolicacid, collagen, polyorthoesters, and polylactic acid alone or with awax, or other materials well known in the art. Methods for thepreparation of such formulations are generally known to those skilled inthe art.

Sterile injectable solutions may be prepared by incorporating the activecompound in the required amount in an appropriate solvent with one or acombination of ingredients e.g. as enumerated above, as required,followed by sterilization microfiltration. Generally, dispersions areprepared by incorporating the active compound into a sterile vehiclethat contains a basic dispersion medium and the required otheringredients e.g. from those enumerated above. In the case of sterilepowders for the preparation of sterile injectable solutions, examples ofmethods of preparation are vacuum drying and freeze-drying(lyophilization) that yield a powder of the active ingredient plus anyadditional desired ingredient from a previously sterile-filteredsolution thereof.

Also disclosed is the use of a disclosed bispecific antibody for use asa medicament for the treatment of various forms of cancer, includingmetastatic cancer and refractory cancer.

Methods of Treatment

Also disclosed is a method for treating a TAG-72-expressing cancer in asubject by administering to the subject a therapeutically effectiveamount of the disclosed pharmaceutical composition. The method canfurther involve administering to the subject lenalidomide, or ananalogue or derivative thereof.

The disclosed compositions, including pharmaceutical composition, may beadministered in a number of ways depending on whether local or systemictreatment is desired, and on the area to be treated. For example, thedisclosed compositions can be administered intravenously,intraperitoneally, intramuscularly, subcutaneously, intracavity, ortransdermally. The compositions may be administered orally, parenterally(e.g., intravenously), by intramuscular injection, by intraperitonealinjection, transdermally, extracorporeally, ophthalmically, vaginally,rectally, intranasally, topically or the like, including topicalintranasal administration or administration by inhalant.

Parenteral administration of the composition, if used, is generallycharacterized by injection. Injectables can be prepared in conventionalforms, either as liquid solutions or suspensions, solid forms suitablefor solution of suspension in liquid prior to injection, or asemulsions. A revised approach for parenteral administration involves useof a slow release or sustained release system such that a constantdosage is maintained.

The compositions disclosed herein may be administered prophylacticallyto patients or subjects who are at risk for a TAG-72-expressing cancer.Thus, the method can further comprise identifying a subject at risk fora TAG-72-expressing cancer prior to administration of the hereindisclosed compositions.

The exact amount of the compositions required will vary from subject tosubject, depending on the species, age, weight and general condition ofthe subject, the severity of the allergic disorder being treated, theparticular nucleic acid or vector used, its mode of administration andthe like. Thus, it is not possible to specify an exact amount for everycomposition. However, an appropriate amount can be determined by one ofordinary skill in the art using only routine experimentation given theteachings herein. For example, effective dosages and schedules foradministering the compositions may be determined empirically, and makingsuch determinations is within the skill in the art. The dosage rangesfor the administration of the compositions are those large enough toproduce the desired effect in which the symptoms disorder are affected.The dosage should not be so large as to cause adverse side effects, suchas unwanted cross-reactions, anaphylactic reactions, and the like.Generally, the dosage will vary with the age, condition, sex and extentof the disease in the patient, route of administration, or whether otherdrugs are included in the regimen, and can be determined by one of skillin the art. The dosage can be adjusted by the individual physician inthe event of any counterindications. Dosage can vary, and can beadministered in one or more dose administrations daily, for one orseveral days. Guidance can be found in the literature for appropriatedosages for given classes of pharmaceutical products. A typical dailydosage of the disclosed composition used alone might range from about 1μg/kg to up to 100 mg/kg of body weight or more per day, depending onthe factors mentioned above.

In some embodiments, the molecule is administered in a dose equivalentto parenteral administration of about 0.1 ng to about 100 g per kg ofbody weight, about 10 ng to about 50 g per kg of body weight, about 100ng to about 1 g per kg of body weight, from about 1 μg to about 100 mgper kg of body weight, from about 1 μg to about 50 mg per kg of bodyweight, from about 1 mg to about 500 mg per kg of body weight; and fromabout 1 mg to about 50 mg per kg of body weight. Alternatively, theamount of molecule containing lenalidomide administered to achieve atherapeutic effective dose is about 0.1 ng, 1 ng, 10 ng, 100 ng, 1 μg,10 μg, 100 μg, 1 mg, 2 mg, 3 mg, 4 mg, 5 mg, 6 mg, 7 mg, 8 mg, 9 mg, 10mg, 11 mg, 12 mg, 13 mg, 14 mg, 15 mg, 16 mg, 17 mg, 18 mg, 19 mg, 20mg, 30 mg, 40 mg, 50 mg, 60 mg, 70 mg, 80 mg, 90 mg, 100 mg, 500 mg perkg of body weight or greater.

The cancer of the disclosed methods can be any TAG-72-expressing cell ina subject undergoing unregulated growth, invasion, or metastasis. Insome aspects, the cancer can be any neoplasm or tumor for whichradiotherapy is currently used. Alternatively, the cancer can be aneoplasm or tumor that is not sufficiently sensitive to radiotherapyusing standard methods. Thus, the cancer can be a sarcoma, lymphoma,leukemia, carcinoma, blastoma, or germ cell tumor. A representative butnon-limiting list of cancers that the disclosed compositions can be usedto treat include lymphoma, B cell lymphoma, T cell lymphoma, mycosisfungoides, Hodgkin's Disease, myeloid leukemia, bladder cancer, braincancer, nervous system cancer, head and neck cancer, squamous cellcarcinoma of head and neck, kidney cancer, lung cancers such as smallcell lung cancer and non-small cell lung cancer,neuroblastoma/glioblastoma, ovarian cancer, pancreatic cancer, prostatecancer, skin cancer, liver cancer, melanoma, squamous cell carcinomas ofthe mouth, throat, larynx, and lung, colon cancer, cervical cancer,cervical carcinoma, breast cancer, epithelial cancer, renal cancer,genitourinary cancer, pulmonary cancer, esophageal carcinoma, head andneck carcinoma, large bowel cancer, hematopoietic cancers; testicularcancer; colon and rectal cancers, prostatic cancer, and pancreaticcancer.

A bispecific antibody may also be administered prophylactically in orderto reduce the risk of developing cancer, delay the onset of theoccurrence of an event in cancer progression, and/or reduce the risk ofrecurrence when a cancer is in remission.

The disclosed bispecific antibodies may also be administered incombination therapy, i.e., combined with other therapeutic agentsrelevant for the disease or condition to be treated. Accordingly, in oneembodiment, the antibody-containing medicament is for combination withone or more further therapeutic agent, such as a cytotoxic,chemotherapeutic, or anti-angiogenic agent.

In some embodiments, such an additional therapeutic agent may beselected from an antimetabolite, such as methotrexate, 6-mercaptopurine,6-thioguanine, cytarabine, fludarabine, 5-fluorouracil, decarbazine,hydroxyurea, asparaginase, gemcitabine or cladribine.

In some embodiments, such an additional therapeutic agent may beselected from an alkylating agent, such as mechlorethamine, thioepa,chlorambucil, melphalan, carmustine (BSNU), lomustine (CCNU),cyclophosphamide, busulfan, dibromomannitol, streptozotocin, dacarbazine(DTIC), procarbazine, mitomycin C, cisplatin and other platinumderivatives, such as carboplatin.

In some embodiments, such an additional therapeutic agent may beselected from an anti-mitotic agent, such as taxanes, for instancedocetaxel, and paclitaxel, and vinca alkaloids, for instance vindesine,vincristine, vinblastine, and vinorelbine.

In some embodiments, such an additional therapeutic agent may beselected from a topoisomerase inhibitor, such as topotecan oririnotecan, or a cytostatic drug, such as etoposide and teniposide.

In some embodiments, such an additional therapeutic agent may beselected from a growth factor inhibitor, such as an inhibitor of ErbB1(EGFR) (such as an EGFR antibody, e.g. zalutumumab, cetuximab,panitumumab or nimotuzumab or other EGFR inhibitors, such as gefitinibor erlotinib), another inhibitor of ErbB2 (HER2/neu) (such as a HER2antibody, e.g. trastuzumab, trastuzumab-DM I or pertuzumab) or aninhibitor of both EGFR and HER2, such as lapatinib).

In some embodiments, such an additional therapeutic agent may beselected from a tyrosine kinase inhibitor, such as imatinib (Glivec,Gleevec STI571) or lapatinib.

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bean anti-cancer immunogen, such as a cancer antigen/tumor-associatedantigen (e.g., epithelial cell adhesion molecule (EpCAM/TACSTDI), mucin1 (MUC1), carcinoembryonic antigen (CEA), tumor-associated glycoprotein72 (TAG-72), gplOO, Melan-A, MART-1, KDR, RCASI, MDA7, cancer-associatedviral vaccines (e.g., human papillomavirus vaccines) or tumor-derivedheat shock proteins.

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bean anti-cancer cytokine, chemokine, or combination thereof. Examples ofsuitable cytokines and growth factors include IFNy, IL-2, IL-4, IL-6,IL-7, IL-10, IL-12, IL-13, IL-15, IL-18, IL-23, IL-24, IL-27, IL-28a,IL-28b, IL-29, KGF, IFNa (e.g., INFa2b), IFN, GM-CSF, CD40L, Flt3ligand, stem cell factor, ancestim, and TNFa. Suitable chemokines mayinclude Glu-Leu-Arg (ELR)-negative chemokines such as IP-10, MCP-3, MIG,and SDF-la from the human CXC and C-C chemokine families. Suitablecytokines include cytokine derivatives, cytokine variants, cytokinefragments, and cytokine fusion proteins.

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bea cell cycle control/apoptosis regulator (or “regulating agent”). A cellcycle control/apoptosis regulator may include molecules that target andmodulate cell cycle control/apoptosis regulators such as (i) cdc-25(such as NSC 663284), (ii) cyclin-dependent kinases that overstimulatethe cell cycle (such as flavopiridol (L868275, HMR1275),7-hydroxystaurosporine (UCN-01, KW-2401), and roscovitine(R-roscovitine, CYC202)), and (iii) telomerase modulators (such asBIBR1532, SOT-095, GRN163 and compositions described in for instanceU.S. Pat. Nos. 6,440,735 and 6,713,055). Non-limiting examples ofmolecules that interfere with apoptotic pathways include TNF-relatedapoptosis-inducing ligand (TRAIL)/apoptosis-2 ligand (Apo-2L),antibodies that activate TRAIL receptors, IFNs, and anti-sense BcI-2.

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bea hormonal regulating agent, such as agents useful for anti-androgen andanti-estrogen therapy. Examples of such hormonal regulating agents aretamoxifen, idoxifene, fulvestrant, droloxifene, toremifene, raloxifene,diethylstilbestrol, ethinyl estradiol/estinyl, an antiandrogene (such asflutaminde/eulexin), a progestin (such as such as hydroxyprogesteronecaproate, medroxy-progesterone/provera, megestrol acepate/megace), anadrenocorticosteroid (such as hydrocortisone, prednisone), luteinizinghormone-releasing hormone (and analogs thereof and other LHRH agonistssuch as buserelin and goserelin), an aromatase inhibitor (such asanastrazole/arimidex, aminoglutethimide/cytraden, exemestane) or ahormone inhibitor (such as octreotide/sandostatin).

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bean anti-anergic agent, such asmolecules that block the activity ofCTLA-4, e.g. ipilimumab.

In some embodiments, a therapeutic agent for use in combination with abispecific antibody for treating the disorders as described above may bean anti-cancer nucleic acid or an anti-cancer inhibitory RNA molecule.

In some embodiments, the bispecific antibody is for use in combinationwith one or more other therapeutic antibodies, such as ofatumumab,zanolimumab, daratumumab, ranibizumab, nimotuzumab, panitumumab, hu806,daclizumab (Zenapax), basiliximab (Simulect), infliximab (Remicade),adalimumab (Humira), natalizumab (Tysabri), omalizumab (Xolair),efalizumab (Raptiva) and/or rituximab.

Combined administration, as described above, may be simultaneous,separate, or sequential. For simultaneous administration the agents maybe administered as one composition or as separate compositions, asappropriate.

In some embodiments, the disclosed bispecific is administered incombination with radiotherapy. Radiotherapy may comprise radiation orassociated administration of radiopharmaceuticals to a patient isprovided. The source of radiation may be either external or internal tothe patient being treated (radiation treatment may, for example, be inthe form of external beam radiation therapy (EBRT) or brachytherapy(BT)). Radioactive elements that may be used in practicing such methodsinclude, e.g., radium, cesium-137, iridium-192, americium-241, gold-198,cobalt-57, copper-67, technetium-99, iodide-123, iodide-131, andindium-111.

In some embodiments, the disclosed bispecific antibody is administeredin combination with surgery.

Definitions

The term “antibody” refers to an immunoglobulin, derivatives thereofwhich maintain specific binding ability, and proteins having a bindingdomain which is homologous or largely homologous to an immunoglobulinbinding domain. These proteins may be derived from natural sources, orpartly or wholly synthetically produced. An antibody may be monoclonalor polyclonal. The antibody may be a member of any immunoglobulin classfrom any species, including any of the human classes: IgG, IgM, IgA,IgD, and IgE. In exemplary embodiments, antibodies used with the methodsand compositions described herein are derivatives of the IgG class.

The term “antibody fragment” refers to any derivative of an antibodywhich is less than full-length. In exemplary embodiments, the antibodyfragment retains at least a significant portion of the full-lengthantibody's specific binding ability. Examples of antibody fragmentsinclude, but are not limited to, Fab, Fab′, F(ab′)2, scFv, Fv, dsFvdiabody, Fc, and Fd fragments. The antibody fragment may be produced byany means. For instance, the antibody fragment may be enzymatically orchemically produced by fragmentation of an intact antibody, it may berecombinantly produced from a gene encoding the partial antibodysequence, or it may be wholly or partially synthetically produced. Theantibody fragment may optionally be a single chain antibody fragment.Alternatively, the fragment may comprise multiple chains which arelinked together, for instance, by disulfide linkages. The fragment mayalso optionally be a multimolecular complex. A functional antibodyfragment will typically comprise at least about 50 amino acids and moretypically will comprise at least about 200 amino acids.

The term “antigen binding site” refers to a region of an antibody thatspecifically binds an epitope on an antigen.

The term “bispecific antibody” refers to an antibody having twodifferent antigen-binding regions defined by different antibodysequences. This can be understood as different target binding butincludes as well binding to different epitopes in one target.

The term “carrier” means a compound, composition, substance, orstructure that, when in combination with a compound or composition, aidsor facilitates preparation, storage, administration, delivery,effectiveness, selectivity, or any other feature of the compound orcomposition for its intended use or purpose. For example, a carrier canbe selected to minimize any degradation of the active ingredient and tominimize any adverse side effects in the subject.

The term “engineered antibody” refers to a recombinant molecule thatcomprises at least an antibody fragment comprising an antigen bindingsite derived from the variable domain of the heavy chain and/or lightchain of an antibody and may optionally comprise the entire or part ofthe variable and/or constant domains of an antibody from any of the Igclasses (for example IgA, IgD, IgE, IgG, IgM and IgY).

The term “epitope” refers to the region of an antigen to which anantibody binds preferentially and specifically. A monoclonal antibodybinds preferentially to a single specific epitope of a molecule that canbe molecularly defined. In the present invention, multiple epitopes canbe recognized by a multispecific antibody.

A “fusion protein” or “fusion polypeptide” refers to a hybridpolypeptide which comprises polypeptide portions from at least twodifferent polypeptides. The portions may be from proteins of the sameorganism, in which case the fusion protein is said to be “intraspecies”,“intragenic”, etc. In various embodiments, the fusion polypeptide maycomprise one or more amino acid sequences linked to a first polypeptide.In the case where more than one amino acid sequence is fused to a firstpolypeptide, the fusion sequences may be multiple copies of the samesequence, or alternatively, may be different amino acid sequences. Afirst polypeptide may be fused to the N-terminus, the C-terminus, or theN- and C-terminus of a second polypeptide. Furthermore, a firstpolypeptide may be inserted within the sequence of a second polypeptide.

The term “Fab fragment” refers to a fragment of an antibody comprisingan antigen-binding site generated by cleavage of the antibody with theenzyme papain, which cuts at the hinge region N-terminally to theinter-H-chain disulfide bond and generates two Fab fragments from oneantibody molecule.

The term “F(ab′)2 fragment” refers to a fragment of an antibodycontaining two antigen-binding sites, generated by cleavage of theantibody molecule with the enzyme pepsin which cuts at the hinge regionC-terminally to the inter-H-chain disulfide bond.

The term “Fc fragment” refers to the fragment of an antibody comprisingthe constant domain of its heavy chain.

The term “Fv fragment” refers to the fragment of an antibody comprisingthe variable domains of its heavy chain and light chain.

“Gene construct” refers to a nucleic acid, such as a vector, plasmid,viral genome or the like which includes a “coding sequence” for apolypeptide or which is otherwise transcribable to a biologically activeRNA (e.g., antisense, decoy, ribozyme, etc), may be transfected intocells, e.g. in certain embodiments mammalian cells, and may causeexpression of the coding sequence in cells transfected with theconstruct. The gene construct may include one or more regulatoryelements operably linked to the coding sequence, as well as intronicsequences, polyadenylation sites, origins of replication, marker genes,etc.

The term “isolated polypeptide” refers to a polypeptide, which may beprepared from recombinant DNA or RNA, or be of synthetic origin, somecombination thereof, or which may be a naturally-occurring polypeptide,which (1) is not associated with proteins with which it is normallyassociated in nature, (2) is isolated from the cell in which it normallyoccurs, (3) is essentially free of other proteins from the same cellularsource, (4) is expressed by a cell from a different species, or (5) doesnot occur in nature.

The term “isolated nucleic acid” refers to a polynucleotide of genomic,cDNA, synthetic, or natural origin or some combination thereof, which(1) is not associated with the cell in which the “isolated nucleic acid”is found in nature, or (2) is operably linked to a polynucleotide towhich it is not linked in nature.

The term “linker” is art-recognized and refers to a molecule or group ofmolecules connecting two compounds, such as two polypeptides. The linkermay be comprised of a single linking molecule or may comprise a linkingmolecule and a spacer molecule, intended to separate the linkingmolecule and a compound by a specific distance.

The term “multivalent antibody” refers to an antibody or engineeredantibody comprising more than one antigen recognition site. For example,a “bivalent” antibody has two antigen recognition sites, whereas a“tetravalent” antibody has four antigen recognition sites. The terms“monospecific”, “bispecific”, “trispecific”, “tetraspecific”, etc. referto the number of different antigen recognition site specificities (asopposed to the number of antigen recognition sites) present in amultivalent antibody. For example, a “monospecific” antibody's antigenrecognition sites all bind the same epitope. A “bispecific” antibody hasat least one antigen recognition site that binds a first epitope and atleast one antigen recognition site that binds a second epitope that isdifferent from the first epitope. A “multivalent monospecific” antibodyhas multiple antigen recognition sites that all bind the same epitope. A“multivalent bispecific” antibody has multiple antigen recognitionsites, some number of which bind a first epitope and some number ofwhich bind a second epitope that is different from the first epitope.

The term “nucleic acid” refers to a polymeric form of nucleotides,either ribonucleotides or deoxynucleotides or a modified form of eithertype of nucleotide. The terms should also be understood to include, asequivalents, analogs of either RNA or DNA made from nucleotide analogs,and, as applicable to the embodiment being described, single-stranded(such as sense or antisense) and double-stranded polynucleotides.

The term “pharmaceutically acceptable” refers to those compounds,materials, compositions, and/or dosage forms which are, within the scopeof sound medical judgment, suitable for use in contact with the tissuesof human beings and animals without excessive toxicity, irritation,allergic response, or other problems or complications commensurate witha reasonable benefit/risk ratio.

As used herein, “peptidomimetic” means a mimetic of a peptide whichincludes some alteration of the normal peptide chemistry.Peptidomimetics typically enhance some property of the original peptide,such as increase stability, increased efficacy, enhanced delivery,increased half life, etc. Methods of making peptidomimetics based upon aknown polypeptide sequence is described, for example, in U.S. Pat. Nos.5,631,280; 5,612,895; and 5,579,250. Use of peptidomimetics can involvethe incorporation of a non-amino acid residue with non-amide linkages ata given position. One embodiment of the present invention is apeptidomimetic wherein the compound has a bond, a peptide backbone or anamino acid component replaced with a suitable mimic. Some non-limitingexamples of unnatural amino acids which may be suitable amino acidmimics include β-alanine, L-α-amino butyric acid, L-γ-amino butyricacid, L-α-amino isobutyric acid, L-ϵ-amino caproic acid, 7-aminoheptanoic acid, L-aspartic acid, L-glutamic acid,N-ϵ-Boc-N-α-CBZ-L-lysine, N-ϵ-Boc-N-α-Fmoc-L-lysine, L-methioninesulfone, L-norleucine, L-norvaline, N-α-Boc-N-δCBZ-L-ornithine,N-δ-Boc-N-α-CBZ-L-ornithine, Boc-p-nitro-L-phenylalanine,Boc-hydroxyproline, and Boc-L-thioproline.

The term “protein” (if single-chain), “polypeptide” and “peptide” areused interchangeably herein when referring to a gene product, e.g., asmay be encoded by a coding sequence. When referring to “polypeptide”herein, a person of skill in the art will recognize that a protein canbe used instead, unless the context clearly indicates otherwise. A“protein” may also refer to an association of one or more polypeptides.By “gene product” is meant a molecule that is produced as a result oftranscription of a gene. Gene products include RNA molecules transcribedfrom a gene, as well as proteins translated from such transcripts.

The terms “polypeptide fragment” or “fragment”, when used in referenceto a particular polypeptide, refers to a polypeptide in which amino acidresidues are deleted as compared to the reference polypeptide itself,but where the remaining amino acid sequence is usually identical to thatof the reference polypeptide. Such deletions may occur at theamino-terminus or carboxy-terminus of the reference polypeptide, oralternatively both. Fragments typically are at least about 5, 6, 8 or 10amino acids long, at least about 14 amino acids long, at least about 20,30, 40 or 50 amino acids long, at least about 75 amino acids long, or atleast about 100, 150, 200, 300, 500 or more amino acids long. A fragmentcan retain one or more of the biological activities of the referencepolypeptide. In various embodiments, a fragment may comprise anenzymatic activity and/or an interaction site of the referencepolypeptide. In another embodiment, a fragment may have immunogenicproperties.

The term “single chain variable fragment or scFv” refers to an Fvfragment in which the heavy chain domain and the light chain domain arelinked. One or more scFv fragments may be linked to other antibodyfragments (such as the constant domain of a heavy chain or a lightchain) to form antibody constructs having one or more antigenrecognition sites.

The term “specifically binds”, as used herein, when referring to apolypeptide (including antibodies) or receptor, refers to a bindingreaction which is determinative of the presence of the protein orpolypeptide or receptor in a heterogeneous population of proteins andother biologics. Thus, under designated conditions (e.g. immunoassayconditions in the case of an antibody), a specified ligand or antibody“specifically binds” to its particular “target” (e.g. an antibodyspecifically binds to an endothelial antigen) when it does not bind in asignificant amount to other proteins present in the sample or to otherproteins to which the ligand or antibody may come in contact in anorganism. Generally, a first molecule that “specifically binds” a secondmolecule has an affinity constant (Ka) greater than about 10⁵ M⁻¹ (e.g.,10⁶ M⁻¹, 10⁷ M⁻¹, 10⁸ M⁻¹, 10⁹ M⁻¹, 10¹⁰ M⁻¹, 10¹¹ M⁻¹, and 10¹² M⁻¹ ormore) with that second molecule.

The term “specifically deliver” as used herein refers to thepreferential association of a molecule with a cell or tissue bearing aparticular target molecule or marker and not to cells or tissues lackingthat target molecule. It is, of course, recognized that a certain degreeof non-specific interaction may occur between a molecule and anon-target cell or tissue. Nevertheless, specific delivery, may bedistinguished as mediated through specific recognition of the targetmolecule. Typically specific delivery results in a much strongerassociation between the delivered molecule and cells bearing the targetmolecule than between the delivered molecule and cells lacking thetarget molecule.

The term “subject” refers to any individual who is the target ofadministration or treatment. The subject can be a vertebrate, forexample, a mammal. Thus, the subject can be a human or veterinarypatient. The term “patient” refers to a subject under the treatment of aclinician, e.g., physician.

The term “therapeutically effective” refers to the amount of thecomposition used is of sufficient quantity to ameliorate one or morecauses or symptoms of a disease or disorder. Such amelioration onlyrequires a reduction or alteration, not necessarily elimination.

The term “treatment” refers to the medical management of a patient withthe intent to cure, ameliorate, stabilize, or prevent a disease,pathological condition, or disorder. This term includes activetreatment, that is, treatment directed specifically toward theimprovement of a disease, pathological condition, or disorder, and alsoincludes causal treatment, that is, treatment directed toward removal ofthe cause of the associated disease, pathological condition, ordisorder. In addition, this term includes palliative treatment, that is,treatment designed for the relief of symptoms rather than the curing ofthe disease, pathological condition, or disorder; preventativetreatment, that is, treatment directed to minimizing or partially orcompletely inhibiting the development of the associated disease,pathological condition, or disorder; and supportive treatment, that is,treatment employed to supplement another specific therapy directedtoward the improvement of the associated disease, pathologicalcondition, or disorder.

A number of embodiments of the invention have been described.Nevertheless, it will be understood that various modifications may bemade without departing from the spirit and scope of the invention.Accordingly, other embodiments are within the scope of the followingclaims.

A number of embodiments of the invention have been described.Nevertheless, it will be understood that various modifications may bemade without departing from the spirit and scope of the invention.Accordingly, other embodiments are within the scope of the followingclaims.

A number of embodiments of the invention have been described.Nevertheless, it will be understood that various modifications may bemade without departing from the spirit and scope of the invention.Accordingly, other embodiments are within the scope of the followingclaims.

EXAMPLES Example 1 Bispecific Tandem Antibody for Cancer ImmunotherapyMaterials and Methods

A tandem BITE antibody was produced using a proprietary linker toenhance half-life of the antibody and minimize immunogenicity of theBITE protein. The initial TAG-72 binding candidate focused on a sequenceknown as 83D4. The CD3 binding clone used is a well characterized OKT3binding antibody (FIG. 1 ).

Sequences

CC49_VH (GenBank accession: L14553) (SEQ ID NO: 1)caggttcagttgcagcagtctgacgctgagttggtgaaacctggggcttcagtgaagatttcctgcaaggcttctggctacaccttcactgaccatgcaattcactgggtgaaacagaaccctgaacagggcctggaatggattggatatttttctcccggaaatgatgattttaaatacaatgagaggttcaagggcaaggccacactgactgcagacaaatcctccagcactgcctacgtgcagctcaacagcctgacatctgaggattctgcagtgtatttctgtacaagatccctgaatatggcctactggggtcaaggaacctcagtcaccgtctcctca. (SEQ ID NO: 2)QVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQNPEQGLEWIGYFSPGNDDFKYNERFKGKATLTADKSSSTAYVQLNSLTSEDSAVYFCTRSL NMAYWGQGTSVTVSS.CC49_VL (GenBank accession: L14553) (SEQ ID NO: 3)gacattgtgatgtcacagtctccatcctccctacctgtgtcagttggcgagaaggttactttgagctgcaagtccagtcagagccttttatatagtggtaatcaaaagaactacttggcctggtaccagcagaaaccagggcagtctcctaaactgctgatttactgggcatccgctagggaatctggggtccctgatcgcttcacaggcagtggatctgggacagatttcactctctccatcagcagtgtgaagactgaagacctggcagtttattactgtcagcagtattatagctatcccctcacgttcggtgctgggaccaagctggtgctgaaa. (SEQ ID NO: 4)DIVMSQSPSSLPVSVGEKVTLSCKSSQSLLYSGNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLSISSVKTEDLAVYYCQQYYSY PLTFGAGTKLVLK.nter_scFv_linker (SEQ ID NO: 5) LSADDAKKDAAKKDDAKKDDAKKDLCC49_scFv_1 (VH-linker-VL) (SEQ ID NO: 6)QVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQNPEQGLEWIGYFSPGNDDFKYNERFKGKATLTADKSSSTAYVQLNSLTSEDSAVYFCTRSLNMAYWGQGTSVTVSSLSADDAKKDAAKKDDAKKDDAKKDLDIVMSQSPSSLPVSVGEKVTLSCKSSQSLLYSGNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLSISSVKTEDLAVYYCQQYYSYPLTFGAGTKL VLK.CC49_scFv_2 (VL-linker-VH) (SEQ ID NO: 7)DIVMSQSPSSLPVSVGEKVTLSCKSSQSLLYSGNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLSISSVKTEDLAVYYCQQYYSYPLTFGAGTKLVLKLSADDAKKDAAKKDDAKKDDAKKDLQVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQNPEQGLEWIGYFSPGNDDFKYNERFKGKATLTADKSSSTAYVQLNSLTSEDSAVYFCTRSLNMAYWGQGTSVT VSS.linker_OKT3_scFv_H6 (SEQ ID NO: 8)gggggggggggatccgatatcaaactgcagcagagcggagccgaactggcaagacccggagcaagcgtcaaaatgtcatgtaaaacctcagggtacacattcactaggtataccatgcactgggtgaaacagcgaccaggacagggtctggagtggatcggatatattaacccctcccgagggtacacaaactacaaccagaagtttaaagacaaggccacactgaccaccgataagtccagctctactgcttacatgcagctgagttcactgaccagcgaggactctgctgtgtactattgcgcaaggtactatgacgatcattactgtctggattattggggccagggaactaccctgactgtgtccagcgtcgaaggcggaagtgggggttcaggcggaagcgggggttctggcggagtcgacgatatccagctgacccagagccccgcaattatgtcagcctcccctggcgaaaaagtgaccatgacatgcagagcctctagttcagtctcctacatgaattggtatcagcagaaaagtggaacaagccctaagagatggatctacgacacttctaaggtggcatccggcgtcccatatcgcttcagcgggtctggtagtggcacttcatactccctgaccatttccagcatggaggctgaagatgccgctacatactattgtcagcagtggtctagtaaccctctgacctttggggctggaactaaactggaactgaagcatcat catcatcatcac.(SEQ ID NO: 9) GGGGSDIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSVEGGSGGSGGSGGSGGVDDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKHH HHHH.CC49_BITE_ 1: CC49_SCFV-1-LINKER-OKT3_SCFV-H6 (SEQ ID NO: 10)QVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQNPEQGLEWIGYFSPGNDDFKYNERFKGKATLTADKSSSTAYVQLNSLTSEDSAVYFCTRSLNMAYWGQGTSVTVSSLSADDAKKDAAKKDDAKKDDAKKDLDIVMSQSPSSLPVSVGEKVTLSCKSSQSLLYSGNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLSISSVKTEDLAVYYCQQYYSYPLTFGAGTKLVLKGGGGSDIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWKQRPGQGLEWGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSVEGGSGGSGGSGGSGGVDDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELKH HHHHH.CC49_BITE_2: CC49_SCFV-2-LINKER-OKT3_SCFV-H6 (SEQ ID NO: 11)DIVMSQSPSSLPVSVGEKVTLSCKSSQSLLYSGNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLSISSVKTEDLAVYYCQQYYSYPLTFGAGTKLVLKLSADDAKKDAAKKDDAKKDDAKKDLQVQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWVKQNPEQGLEWIGYFSPGNDDFKYNERFKGKATLTADKSSSTAYVQLNSLTSEDSAVYFCTRSLNMAYWGQGTSVTVSSGGGGSDIKLQQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSVEGGSGGSGGSGGSGGVDDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLEL KHHHHHH.

Results

The ability of the antibody to activate purified killer CD8+T cellsco-cultured with MCF-7 and MDA-231 cell lines was evaluated using a LDHrelease cytotoxicity assay supplied by Cayman Labs per themanufacturer's instructions at different concentrations. Flow cytometrybased binding assays were also performed using a secondary anti-Hisantibody to quantify the binding activity of the 83D4 BITE antibodycandidate. The results indicated that the 83D4 BITE antibody was notable to bind to target cells effectively using the flow cytometery assay(FIG. 2 ) nor activate the killer T cells to lyse the MCF-7 tumor cells(Table 2). The antibody was also tested against a purified form of theTAG-72 immobilized within wells to see if it could recognize the TAG-72target and this was negative as well (Table 1).

TABLE 1 83D4 binding to purified TAG-72 target was negative. CoatingSample A490 Ag-1, 0.05 μg/100 μl/well TGE Supernatant of 83sf-OKT3 0.077Ag-1, 0.05 μg/100 μl/well Medium(DMEM + 10% FCS) 0.072 Ag-1, 0.05 μg/100μl/well PBS 0.072 Ag-2, 0.05 μg/100 μl/well TGE Supernatant of 83sf-OKT30.073 Ag-2, 0.05 μg/100 μl/well Medium(DMEM + 10% FCS) 0.071 Ag-2, 0.05μg/100 μl/well PBS 0.073 Ag-1, 0.5 μg/100 μl/well TGE Supernatant of83sf-OKT3 0.071 Ag-1, 0.5 μg/100 μl/well Medium(DMEM + 10% FCS) 0.070Ag-1, 0.5 μg/100 μl/well PBS 0.069 Ag-2, 0.5 μg/100 μl/well TGESupernatant of 83sf-OKT3 0.070 Ag-2, 0.5 μg/100 μl/well Medium(DMEM +10% FCS) 0.071 Ag-2, 0.5 μg/100 μl/well PBS 0.069 Ag-1, 1 μg/100 μl/wellTGE Supernatant of 83sf-OKT3 0.075 Ag-1, 1 μg/100 μl/well Medium(DMEM +10% FCS) 0.072 Ag-1, 1 μg/100 μl/well PBS 0.073 Ag-2, 1 μg/100 μl/wellTGE Supernatant of 83sf-OKT3 0.071 Ag-2, 1 μg/100 μl/well Medium(DMEM +10% FCS) 0.072 Ag-2, 1 μg/100 μl/well PBS 0.072 control protein with HisTag, PBS 1.449 1 μg/100 μl/well

115_applic

TABLE 2 LDH release assay for MCF-7 cells showing no increase in LDHlevels when antibody was added Sample Concentration (mU/mL) Media 0.46Ab 0.52 PBMC 0.50 MCF7 1.08 MCF7 + Ab 1.03 MCF7 + PBMC 0.96 MCF7 +PBMC + Ab (no wash) 0.96 MCF7 + PBMC + AB (wash) 0.93

The conclusion from these experiments using the 83D4 BITE was that thiswould not be a good candidate to study due to little binding to thetarget. This issue is likely due to the fact that when taking anaturally produced antibody such as the 83D4, there is a significantchance that its binding activity will be altered when syntheticallyproduced in a tandem BITE antibody format. This is part of thedifficulty inherent in developing these types of therapies. Therefore,another TAG-72 clone was selected termed CC49 which had been usedsuccessfully in other antibody formats and binds TAG-72 with goodaffinity. The CC49 sequence was used to prepare an engineered plasmid(FIG. 3 ).

The CC49 antibody exhibited different binding properties when comparedto the initial 83D4 candidate. The initial testing of binding to TAG-72purified target determined that CC49 did indeed recognize and bind theTAG-72 target with higher affinity (Table 3).

TABLE 3 ELISA binding of CC49 to purified TAG-72 target was positive inthis case compared to negative controls. OD490 Items Coating: Mucin(H₂O)Coating: Mucin(HCl) CC49-2/BITE 0.308 0.310 0.364 0.366 Medium 0.0790.077 0.086 0.088 PBS 0.079 0.074 0.083 0.084

Note that the construct with the VH-linker-VL sequence (CC49-1) failedto recognize Jurkat cells (a transformed T cell line that expresses CD3)(FIG. 4A). However, the second construct (CC49-2) with the reversesequence VL-linker-VH does bind to the Jurkat cells indicating that itcan recognize the cells (FIG. 4A).

The binding of CC49 was checked in the MCF-7 cells as well using a flowcytometry assay. This data did show improved binding to the MCF-7 whencompared to the 83D4 but was still relatively weak (FIG. 4B).

The decision was made to also interrogate the antibody on other celllines which were known to have a higher fraction of the TAG-72 targetthat is specifically bound by the CC49 antibody. This is because it isknown that there are some differences in the TAG-72 glycoprotein betweendifferent cell lines and some antibodies may recognize one versionbetter than another. The 83D4 antibody was initially used to bind toMCF-7 cells but a review of the literature suggested that CC49 couldbind certain ovarian cancer cell lines well such as OVACAR-3. There is adose dependent increase in the percentage of cells bound by the antibodyas it is increased from 200 μg to 400 μg (from 9.89% to 18.5%, FIG. 5 ).OVACAR3 target cells that express TAG-72 are bound by TAG-72 BITE underproper culture conditions (FIG. 6 ), and there is evidence of T cellactivation (FIG. 7 ).

The pilot project was successful in producing a candidate BITE antibody(CC49-OKT3) that can bind the TAG-72 purified target and also bind in adose dependent manner to a cancer cell line OVACAR-3.

Example 2 TAG-72 T Cell Engager Antibody

Effective redirected T cell killing is accomplished using a T cellengager antibody against TAG-72 expressed on the surface of breast andovarian cancer cells. Demonstrated is specific binding to the target inthese tissues when the target is expressed, trafficking of T cells tothe malignant cells, activated T cell mediated killing in vitro, andgood biodistribution of the antibody in a mouse model with a humanxenograft +/− infused human T cells to show trafficking of the T cellsto the tumor in vivo.

In vitro testing and characterization of CC49-CD3 TAG-72 is done todetermine optimal relative potency and specificity against variouscancer cell lines (i.e. BT-474, MCF-7, OVACAR-3) in 3D spheroid tumortissue culture systems with naïve T cells added in.

Pharmacokinetics and biodistribution data is generated in tumor bearingNSG mice. Initial in vivo efficacy testing of the CC49-CD3 TAG-72antibody in NSG mice with MCF-7 xenograft tumors with injected humanCD8+ T cells is done to show immune activation and growth inhibition.

Complementary in vivo testing of the CC49-CD3 in CD34+ humanized NSGwith xenografts is done to study immune trafficking in xenografts withand without antibody as well as examination of antibody immunogenicity.

This involves first complete in vitro testing of current CC49 TAG-72 onMCF7, MCF-7 DOX, MB231, OVACAR3 cell line spheroids. Next,sialyltransferase 7A knockout MCF-7 cell lines are generated viaCRISPER/Cas9 double nickase kits and negative control is characterizedby flow and western. Additional CC49 antibody and control 83D4nonbinding BITE are produced in preparation for initial mouseexperiments (estimated at 20mg subject to change based on BD/PKstudies). Finally, IND supporting studies are done to determine animalmodels for immunoreactivity, safety, PK, etc. and human tissues forbinding specificity.

Unless defined otherwise, all technical and scientific terms used hereinhave the same meanings as commonly understood by one of skill in the artto which the disclosed invention belongs. Publications cited herein andthe materials for which they are cited are specifically incorporated byreference.

Those skilled in the art will recognize, or be able to ascertain usingno more than routine experimentation, many equivalents to the specificembodiments of the invention described herein. Such equivalents areintended to be encompassed by the following claims.

What is claimed is:
 1. A bispecific antibody, comprising an anti-TAG72 single chain variable fragment (scFv) antibody that specifically binds human TAG72 linked to an anti-CD3 scFv that specifically binds human CD3 epsilon subunit; wherein the anti-TAG72 scFv comprises a variable heavy (V_(H)) domain and a variable light (V_(L)) domain separated by a peptide linker; wherein the V_(H) domain comprises CDR1, CDR2 and CDR3 domains having the amino acid sequences of SEQ ID NOs: 12, 13 and 14, respectively; and wherein the V_(L) domain comprises CDR1, CDR2 and CDR3 domains having the amino acid sequences of SEQ ID NOs: 15, 16 and 17, respectively.
 2. The bispecific antibody of claim 1, wherein the anti-CD3 scFv comprises the amino acid sequence of SEQ ID NO:19.
 3. The bispecific antibody of claim 1, wherein the anti-TAG72 V_(H) domain comprises the amino acid sequence of SEQ ID NO:
 2. 4. The bispecific antibody of claim 1, wherein the anti-TAG72 VL domain comprises the amino acid sequence of SEQ ID NO:4.
 5. The bispecific antibody of claim 1, wherein the anti-CD3 scFv comprises the amino acid sequence of SEQ ID NO:19.
 6. The bispecific antibody of claim 1, wherein the antibody comprises the amino acid sequence of SEQ ID NO:
 11. 7. A pharmaceutical composition comprising the bispecific antibody of claim 1 in a pharmaceutically acceptable carrier.
 8. A method for treating a TAG72 expressing breast or ovarian cancer in a subject in need thereof, comprising administering to the subject a therapeutically effective amount of the pharmaceutical composition of claim 7, wherein the anti-CD3 scFv comprises the amino acid sequence of SEQ ID NO:19. 